Programming
Math for biomedical modelling
Computational Fluid Dynamics
- Navier-Stokes benchmark;
FreeFem code to validate and benchmark an unsteady NS solver.
- Dropipe;
FreeFem code to validate pressure drop in CFD simulation.
- Cerebral Venous Network; [currently private]
FreeFem, Python and Octave codes to pre-process raw data from medical acquisitions,
simulate the venous blood flow and post-process results.
- 2D Bifurcation sandbox problem; [currently private]
FreeFem and Octave of 2D vascular toy problem.
- Windkessel BC for FreeFEM
.idp
file to build implicit Windkessel BC matrices in FreeFEM.
Physiological modelling
- Flow rate manager;
Octave module to process and resample flow rate acquisition.
- Center lines; [currently private]
Octave module to load, display and manage center line from vessel networks.
Reduced Order Modelling
Reduced Basis Methods
Associated modules
- Empirical Interpolation Method;
FreeFEM version;
Octave version.
code to perform EIM on data set.
- Parametrized-Background Data-Weak; [currently private]
Octave module to run PBDW state estimations.
Numerical Analysis
- Radial Basis Function;
Octave module to perform RBF interpolation with several kernel functions.
- Non-Parametric Estimation; [currently private].
Miscellaneous